Seqtk Homebrew Formulae





seqtk Homebrew Formulae

seqtk. Install command: brew install seqtk. Toolkit for processing sequences in FASTA/Q formats.

seqkit Homebrew Formulae

Homebrews package index. Cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang

Homebrew Formulae

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seqtk 1.3 on Homebrew - Libraries.io

Seqtk is a fast and lightweight tool for processing sequences in the FASTA orFASTQ format. It seamlessly parses both FASTA and FASTQ files which can also beoptionally compressed by gzip. To install seqtk, git clone https://github.com/lh3/seqtk.git;cdseqtk;make. The only library dependency is zlib. Seqtk Examples.

homebrew-core/seqtk.rb at master Homebrew/homebrew-core

Default formulae for the missing package manager for macOS (or Linux) - homebrew-core/seqtk.rb at master Homebrew/homebrew-core

homebrew-science/seqtk.rb at master christianurich/homebrew-science

Scientific formulae for the Homebrew package manager - homebrew-science/seqtk.rb at master christianurich/homebrew-science

linuxbrew-core/seqtk.rb at master Homebrew/linuxbrew-core

Formerly the core formulae for the Homebrew package manager on Linux - linuxbrew-core/seqtk.rb at master Homebrew/linuxbrew-core

homebrew-science/seqtk.rb at master tdsmith/homebrew-science

Scientific formulae for the Homebrew package manager - homebrew-science/seqtk.rb at master tdsmith/homebrew-science

lh3/seqtk: Toolkit for processing sequences in FASTA/Q formats - GitHub

seqtk seq -M reg.bed in.fa > out.fa Subsample 10000 read pairs from two large paired FASTQ files (remember to use the same random seed to keep pairing): seqtk sample -s100 read1.fq 10000 > sub1.fq seqtk sample -s100 read2.fq 10000 > sub2.fq

homebrew-science/seqtk.rb at master ScottKolo/homebrew-science

:microscope: Scientific formulae for the Homebrew package manager - homebrew-science/seqtk.rb at master ScottKolo/homebrew-science

semtag Homebrew Formulae

https://github.com/nico2sh/semtag. License: Apache-2.0. Formula JSON API: /api/formula/semtag.json. Bottle JSON API: /api/bottle/semtag.json. Formula code: semtag.rb on GitHub. Bottle (binary package) installation support provided. Current versions:

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class Seqtk Formula desc "Toolkit for processing sequences in FASTA/Q formats" homepage "https://github.com/lh3/seqtk" url "https://github.com/lh3/seqtk/archive/v1.3 ...

seqtk/seqtk BioLib

Seqtk. Toolkit for processing sequences in FASTA/Q formats. How to use Seqtk in Python. Find a tutorial on how to use Seqtk in this Colaboratory notebook. Seqtk functions. Find a webserver for each of the functions here. Subset: Extracts the sequences that have as headers, the headers provided in a separate list file

gtk+ Homebrew Formulae

atk: 2.38.0: GNOME accessibility toolkit: gdk-pixbuf: 2.42.10: Toolkit for image loading and pixel buffer manipulation: hicolor-icon-theme: 0.17: Fallback theme for FreeDesktop.org icon themes

homebrew-seqtk : Free Download, Borrow, and Streaming : Internet Archive

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GitHub - ashisha7i/homebrew-formulae

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Acceptable Formulae Homebrew Documentation

Requirements for homebrew/core Supported platforms. The formula needs to build and pass tests on the latest 3 supported macOS versions (x86_64 and Apple Silicon/ARM) and on x86_64 Linux. Please have a look at the continuous integration jobs on a pull request in homebrew/core to see the full list of OSs. If upstream does not support one of these platforms, an exception can be made and the formula can be disabled for that platform.

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class Seqtk Formula desc "Toolkit for processing sequences in FASTA/Q formats" homepage "https://github.com/lh3/seqtk" # tag "bioinformatics" url "https://github.com ...

Formula Cookbook Homebrew Documentation

Formula Cookbook. A formula is a package definition written in Ruby. It can be created with brew create where is a zip or tarball, installed with brew install , and debugged with brew install --debug --verbose . Formulae use the Formula API which provides various Homebrew-specific helpers. Homebrew terminology

wget Homebrew Formulae

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